CLEAN-Contact

Closed weights Cleveland Clinic,Kent State University,Pacific Northwest National Laboratory October 2024

No estimate

No hardware requirements for this model

The weights for this model have not been published, so it cannot be downloaded or run on your own hardware at any size. It is reachable only through its provider, and no graphics card changes that.

On record

Full specification

Everything on record for this model. Most of it describes how it was trained rather than how it runs — useful context for judging how much work went into it, and how it compares with models built at a different scale.

Origin

Who built this model, where, and when it was published.

Organisation
Cleveland Clinic,Kent State University,Pacific Northwest National Laboratory
Organisation type
Academia,Academia,Government
Country
United States of America
Published
8 October 2024
Authors
Yuxin Yang, Abby Jerger, Song Feng, Zixu Wang, Christina Brasfield, Margaret S. Cheung, Jeremy Zucker, Qiang Guan

What it does

The problem areas the model was built for. A model can carry several of each.

Domain
Biology
Task
Enzyme function prediction

Size

How large the model is and how much data it was trained on. Parameters are the figure that decides whether it fits on a given graphics card.

Training data
224,742 tokens

224,742 = 2.24742e5 datapoints (unique protein sequences with contact maps from Swiss-Prot database)

Availability

Whether you can obtain the model and run it on your own hardware, which is what decides if any of the graphics-card figures on this page apply.

Weights
Closed — provider access only
Model access
Unreleased
Training code
Open (non-commercial)

All codes and data used in training and testing are available at https://github.com/pnnl-predictive-phenomics/clean-contact. ( NON-EXCLUSIVE RESEARCH USE LICENSE FOR CLEAN SOFTWARE) CLEAN-Contact is also freely accessible through an easy-to-use web server: https://ersa.guans.cs.kent.edu/

How it is classified

Labels the source dataset applies when tracking notable models, and how confident it is in the entry.

Record confidence
Confident
Citations
1

Sources

Where this record came from and when it was last checked.

Reference
CLEAN-Contact: Contrastive Learning-enabled Enzyme Functional Annotation Prediction with Structural Inference
Last updated
28 November 2025

What the numbers mean

About this model

CLEAN-Contact was published by Cleveland Clinic,Kent State University,Pacific Northwest National Laboratory, in United States of America, in October 2024. It comes out of academia,Academia,Government.

It works in Biology, and is recorded as doing enzyme function prediction.

This is a closed model: the trained values stayed with whoever produced them, and there is no local version to run.

What went into building it

Around 224,742 tokens went into training it.

Answers

CLEAN-Contact — common questions

01

What is CLEAN-Contact used for?

CLEAN-Contact works in Biology, and is recorded as handling enzyme function prediction. These are the areas it was designed around; they describe intent rather than a hard boundary.

02

What GPU do I need to run CLEAN-Contact?

None. CLEAN-Contact is a closed model — its weights were never published, so it cannot be downloaded or run on your own hardware at any price. It is reachable only through its provider.

03

Is CLEAN-Contact open source?

No. CLEAN-Contact has not had its weights published, so it exists only as a service controlled by its owner.

04

How many parameters does CLEAN-Contact have?

No parameter count has been published for CLEAN-Contact, which is why no memory or speed figure appears on this page.

05

Who created CLEAN-Contact?

CLEAN-Contact was published by Cleveland Clinic,Kent State University,Pacific Northwest National Laboratory, based in United States of America, categorised as academia,Academia,Government.

06

When was CLEAN-Contact released?

CLEAN-Contact was published in October 2024. Capability per parameter has improved considerably since, so a newer model of the same size is often the better use of the same hardware.

Source

Original publication

Record last updated 28 November 2025

The other direction

Looking at it from the other side?

This page starts from the model. If you already own a card and want to know everything it will run, start from the hardware instead.